BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A06SP1|AL426624
(792 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1574 1559 0.0
>3x_Contig1574
Length = 8021
Score = 1559 bits (785), Expect = 0.0
Identities = 789/792 (99%)
Strand = Plus / Minus
Query: 1 cctcgtataccacttcagcaacaaatggggaatccacaacaaatgattggaggtcaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1940 cctcgtataccacttcagcaacaaatggggaatccacaacaaatgattggaggtcaacct 1881
Query: 61 ataactcagaatataccagttatgaacagtaatcaatcgatggttccttcgtcacaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1880 ataactcagaatataccagttatgaacagtaatcaatcgatggttccttcgtcacaacag 1821
Query: 121 ccacaatcacaaccaccacaaccaccacaacgacaaccaccacaacgacaacaacaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1820 ccacaatcacaaccaccacaaccaccacaacgacaaccaccacaacgacaacaacaacaa 1761
Query: 181 caagtcccagtttcagtaccacagccacctcaaccatcacaagctgcaatactacagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 caagtcccagtttcagtaccacagccacctcaaccatcacaagctgcaatactacagcaa 1701
Query: 241 gtgcttcagaagtttcagaaacaacttcctgatattcccaaattccaaactattcttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 gtgcttcagaagtttcagaaacaacttcctgatattcccaaattccaaactattcttcaa 1641
Query: 301 gacccacctgagactccattacctcatactaggttatggtcagagaaagaaagagctgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 gacccacctgagactccattacctcatactaggttatggtcagagaaagaaagagctgat 1581
Query: 361 aacgagcctgtgagttttgatacaagattatatgaacatgttattgaacgggatttgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1580 aacgagcctgtgagttttgatacaagattatatgaacatgttattgaacgggatttgttg 1521
Query: 421 gataaggacaacttgttggcggacactaatggattggracctatttccaaattcggattc 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1520 gataaggacaacttgttggcggacactaatggattggaacctatttccaaattcggattc 1461
Query: 481 agtcagagggaggtaatattgagattacagcaagatcttgattattacaaagaattgagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 agtcagagggaggtaatattgagattacagcaagatcttgattattacaaagaattgagg 1401
Query: 541 aacagtcgaatgcnatccattaccaacacaactcaaggacataaatctaagagtatatgg 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 aacagtcgaatgcaatccattaccaacacaactcaaggacataaatctaagagtatatgg 1341
Query: 601 ggtgacggttattctggatatggaaatggcttcagtaacgatctcacaaggattcaagtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 ggtgacggttattctggatatggaaatggcttcagtaacgatctcacaaggattcaagtc 1281
Query: 661 gatgacacttatgaratgcacttggacgaaatatatgaatggacaatgaatcaaacaggg 720
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 gatgacacttatgaaatgcacttggacgaaatatatgaatggacaatgaatcaaacaggg 1221
Query: 721 gaggaactagtacctgttagattagagtttgatgcagaaaaggataaatttactttgagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 gaggaactagtacctgttagattagagtttgatgcagaaaaggataaatttactttgagg 1161
Query: 781 gacacattcgta 792
||||||||||||
Sbjct: 1160 gacacattcgta 1149
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6304
Number of Sequences: 1807
Number of extensions: 6304
Number of successful extensions: 373
Number of sequences better than 1.0e-20: 1
length of query: 792
length of database: 10,358,551
effective HSP length: 16
effective length of query: 776
effective length of database: 10,329,639
effective search space: 8015799864
effective search space used: 8015799864
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)